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	<title>Comments on: Science with Pre-Ordained Conclusions</title>
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	<link>http://henrysthreads.com/2008/07/science-with-pre-ordained-conclusions/</link>
	<description>Thoughts on Religion in the World from a passionate, moderate, liberal charismatic Christian</description>
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		<title>By: Threads from Henry&#8217;s Web &#187; Evolution, Historical Methods, and Assumptions</title>
		<link>http://henrysthreads.com/2008/07/science-with-pre-ordained-conclusions/comment-page-1/#comment-122018</link>
		<dc:creator>Threads from Henry&#8217;s Web &#187; Evolution, Historical Methods, and Assumptions</dc:creator>
		<pubDate>Wed, 24 Sep 2008 14:21:48 +0000</pubDate>
		<guid isPermaLink="false">http://www.energionpubs.com/wordpress/?p=1416#comment-122018</guid>
		<description>[...] Lamb has commented on a post I wrote back in July. I have responded to most of the comment there, but he references an article of his own, [...]</description>
		<content:encoded><![CDATA[<p>[...] Lamb has commented on a post I wrote back in July. I have responded to most of the comment there, but he references an article of his own, [...]</p>
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		<title>By: Henry Neufeld</title>
		<link>http://henrysthreads.com/2008/07/science-with-pre-ordained-conclusions/comment-page-1/#comment-121990</link>
		<dc:creator>Henry Neufeld</dc:creator>
		<pubDate>Wed, 24 Sep 2008 13:02:20 +0000</pubDate>
		<guid isPermaLink="false">http://www.energionpubs.com/wordpress/?p=1416#comment-121990</guid>
		<description>1.  I was aware of the two journals you referenced and would make similar comments about their &quot;peer review.&quot;  I regard them as a pathetic attempt to create respectability where there is none.

2.  I will respond to your &quot;age &lt;em&gt;is&lt;/em&gt; dependent on assumptions&quot; in a separate post which will track back to this one.  I take the time to do this not because you raise anything new, but because you provide an excellent example of self-destructive apologetics.

3.  Finally, as for genetic mutations, the claim that mutations cannot increase information is very simply false.  You can start &lt;a href=&quot;http://www.talkorigins.org/indexcc/CB/CB102.html&quot; rel=&quot;nofollow&quot;&gt;here&lt;/a&gt; if you are actually interested in some data.  Gene reduplication, for example, followed by mutation, can quite clearly increase information.</description>
		<content:encoded><![CDATA[<p>1.  I was aware of the two journals you referenced and would make similar comments about their &#8220;peer review.&#8221;  I regard them as a pathetic attempt to create respectability where there is none.</p>
<p>2.  I will respond to your &#8220;age <em>is</em> dependent on assumptions&#8221; in a separate post which will track back to this one.  I take the time to do this not because you raise anything new, but because you provide an excellent example of self-destructive apologetics.</p>
<p>3.  Finally, as for genetic mutations, the claim that mutations cannot increase information is very simply false.  You can start <a href="http://www.talkorigins.org/indexcc/CB/CB102.html" rel="nofollow">here</a> if you are actually interested in some data.  Gene reduplication, for example, followed by mutation, can quite clearly increase information.</p>
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		<title>By: Andrew Lamb</title>
		<link>http://henrysthreads.com/2008/07/science-with-pre-ordained-conclusions/comment-page-1/#comment-121892</link>
		<dc:creator>Andrew Lamb</dc:creator>
		<pubDate>Wed, 24 Sep 2008 06:22:11 +0000</pubDate>
		<guid isPermaLink="false">http://www.energionpubs.com/wordpress/?p=1416#comment-121892</guid>
		<description>There are two peer-reviewed creationist journals of many years standing - &lt;a href=&quot;http://creationontheweb.com/content/view/2011&quot; rel=&quot;nofollow&quot;&gt;&lt;i&gt;Journal of Creation&lt;/i&gt;&lt;/a&gt; and &lt;a href=&quot;http://www.creationresearch.org/crsq/abstracts.htm&quot; rel=&quot;nofollow&quot;&gt;&lt;i&gt;Creation Research Society Quarterly&lt;/i&gt;&lt;/a&gt;.

Contrary to your assertion Henry, age &lt;i&gt;is&lt;/i&gt; dependent upon assumptions, i.e. age is not something that can be measured.  See the article &lt;a href=&quot;http://creationontheweb.com/content/view/4267&quot; rel=&quot;nofollow&quot;&gt;Immeasurable age&lt;/a&gt;.

Also, there is no one at Creation Ministries International (the publisher of Journal of Creation) who would disagree with the last sentence of your blog above.  There most certainly are some &lt;a href=&quot;http://creationontheweb.com/content/view/3026&quot; rel=&quot;nofollow&quot;&gt;beneficial mutations&lt;/a&gt;, but they invariably involve loss of specified complexity (genetic information) whereas evolution would require massive increases.  Consider the case of &lt;a href=&quot;http://creationontheweb.com/content/view/5390&quot; rel=&quot;nofollow&quot;&gt;CCR5-delta32: a very beneficial mutation&lt;/a&gt;.</description>
		<content:encoded><![CDATA[<p>There are two peer-reviewed creationist journals of many years standing &#8211; <a href="http://creationontheweb.com/content/view/2011" rel="nofollow"><i>Journal of Creation</i></a> and <a href="http://www.creationresearch.org/crsq/abstracts.htm" rel="nofollow"><i>Creation Research Society Quarterly</i></a>.</p>
<p>Contrary to your assertion Henry, age <i>is</i> dependent upon assumptions, i.e. age is not something that can be measured.  See the article <a href="http://creationontheweb.com/content/view/4267" rel="nofollow">Immeasurable age</a>.</p>
<p>Also, there is no one at Creation Ministries International (the publisher of Journal of Creation) who would disagree with the last sentence of your blog above.  There most certainly are some <a href="http://creationontheweb.com/content/view/3026" rel="nofollow">beneficial mutations</a>, but they invariably involve loss of specified complexity (genetic information) whereas evolution would require massive increases.  Consider the case of <a href="http://creationontheweb.com/content/view/5390" rel="nofollow">CCR5-delta32: a very beneficial mutation</a>.</p>
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		<title>By: Larry B</title>
		<link>http://henrysthreads.com/2008/07/science-with-pre-ordained-conclusions/comment-page-1/#comment-113010</link>
		<dc:creator>Larry B</dc:creator>
		<pubDate>Tue, 22 Jul 2008 23:30:51 +0000</pubDate>
		<guid isPermaLink="false">http://www.energionpubs.com/wordpress/?p=1416#comment-113010</guid>
		<description>Just to be clear, I don&#039;t think Anderson&#039;s argument is something that can be used against evolution.  I think the argument is a reasonable objection to laboratory based experiment being extrapolated outward to a larger situation.  The evolutionary scientist could rightly counter by pointing to evidence of &quot;unforced&quot; adaptation already in nature and state that the lab experiment helps to elucidate the process by which that occurs.  Anderson would have the burden of proving that the lab conditions are in someway deficient, in which case, he has only shown that a particular experiment hasn&#039;t proven what it was intended to prove - it does not invalidate the general theory.  That is where Anderson&#039;s logic fails.  

As for the environment question, I can&#039;t particularly put my thumb on it, but maybe it comes from all the recent discussions on global warming.  There seems to be a lot of language that implies that there is one system (mother nature) and then there is the results of our intentional tampering (CO2 emissions from human industrial activity) and the two always seemed to be treated as separate.  In my own mind it creates a division between a &quot;human induced&quot; world and a natural world.  I probably extrapolate that to the situations you described thus leading me to view the lab as separate from the &quot;natural world&quot; in the way that I did.  As you point out, it&#039;s probably not a real distinction.  

I guess my other line of thought would be more to the idea that the lab stress conditions, might never be encountered in the natural world and thus while they may show some change, they don&#039;t indicate what might happen under natural stress conditions.   Your geological separation example is appropriate here.  If I understand correctly, evolution would predict change in this case, but the timeline and the forcing function is vastly different than what we do in the lab.  So does the lab merely show an accelerated view of what happens or an incorrect view because our inputs are vastly different.  I&#039;m not an expert in the field so I can&#039;t really speculate, but nonlinear systems (as I would suspect evolutionary systems are) can behave very differently with even small input changes so I would want to keep that in mind when looking at lab results.</description>
		<content:encoded><![CDATA[<p>Just to be clear, I don&#8217;t think Anderson&#8217;s argument is something that can be used against evolution.  I think the argument is a reasonable objection to laboratory based experiment being extrapolated outward to a larger situation.  The evolutionary scientist could rightly counter by pointing to evidence of &#8220;unforced&#8221; adaptation already in nature and state that the lab experiment helps to elucidate the process by which that occurs.  Anderson would have the burden of proving that the lab conditions are in someway deficient, in which case, he has only shown that a particular experiment hasn&#8217;t proven what it was intended to prove &#8211; it does not invalidate the general theory.  That is where Anderson&#8217;s logic fails.  </p>
<p>As for the environment question, I can&#8217;t particularly put my thumb on it, but maybe it comes from all the recent discussions on global warming.  There seems to be a lot of language that implies that there is one system (mother nature) and then there is the results of our intentional tampering (CO2 emissions from human industrial activity) and the two always seemed to be treated as separate.  In my own mind it creates a division between a &#8220;human induced&#8221; world and a natural world.  I probably extrapolate that to the situations you described thus leading me to view the lab as separate from the &#8220;natural world&#8221; in the way that I did.  As you point out, it&#8217;s probably not a real distinction.  </p>
<p>I guess my other line of thought would be more to the idea that the lab stress conditions, might never be encountered in the natural world and thus while they may show some change, they don&#8217;t indicate what might happen under natural stress conditions.   Your geological separation example is appropriate here.  If I understand correctly, evolution would predict change in this case, but the timeline and the forcing function is vastly different than what we do in the lab.  So does the lab merely show an accelerated view of what happens or an incorrect view because our inputs are vastly different.  I&#8217;m not an expert in the field so I can&#8217;t really speculate, but nonlinear systems (as I would suspect evolutionary systems are) can behave very differently with even small input changes so I would want to keep that in mind when looking at lab results.</p>
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		<title>By: Henry Neufeld</title>
		<link>http://henrysthreads.com/2008/07/science-with-pre-ordained-conclusions/comment-page-1/#comment-112961</link>
		<dc:creator>Henry Neufeld</dc:creator>
		<pubDate>Tue, 22 Jul 2008 11:55:17 +0000</pubDate>
		<guid isPermaLink="false">http://www.energionpubs.com/wordpress/?p=1416#comment-112961</guid>
		<description>On your first point, that&#039;s a good example.  The definition of &quot;peer&quot; is in doubt.  Then I read &lt;a href=&quot;http://scienceblogs.com/evolutionblog/2008/07/is_modern_mathematics_reliable.php&quot; rel=&quot;nofollow&quot;&gt;this post from EvolutionBlog&lt;/a&gt; talking about some reviewers for math papers not actually completing checking the proofs, and one has to say that not all reviews are equal.

On your second, I&#039;d like to hear more.  It seems to me that captivity, for example, is an environment to which an animal can adapt.  Adapting to one environment doesn&#039;t necessarily mean that one remains well adapted to another.

I&#039;d compare it to a situation where a population becomes isolated on an island, say some insects that arrive on a floating log, or in the longer term those that get separated by geological processes (Australia, for example).  How does this differ?  Those on the island or the separate land mass adapt to the environment with which they are presented, and that may make them less survivable in the former environment.  Even our human intelligence has its downside under certain circumstances.

I simply fail to see how this is an argument against evolution, or even a very exciting observation.  It all seems rather obvious.  What am I missing?</description>
		<content:encoded><![CDATA[<p>On your first point, that&#8217;s a good example.  The definition of &#8220;peer&#8221; is in doubt.  Then I read <a href="http://scienceblogs.com/evolutionblog/2008/07/is_modern_mathematics_reliable.php" rel="nofollow">this post from EvolutionBlog</a> talking about some reviewers for math papers not actually completing checking the proofs, and one has to say that not all reviews are equal.</p>
<p>On your second, I&#8217;d like to hear more.  It seems to me that captivity, for example, is an environment to which an animal can adapt.  Adapting to one environment doesn&#8217;t necessarily mean that one remains well adapted to another.</p>
<p>I&#8217;d compare it to a situation where a population becomes isolated on an island, say some insects that arrive on a floating log, or in the longer term those that get separated by geological processes (Australia, for example).  How does this differ?  Those on the island or the separate land mass adapt to the environment with which they are presented, and that may make them less survivable in the former environment.  Even our human intelligence has its downside under certain circumstances.</p>
<p>I simply fail to see how this is an argument against evolution, or even a very exciting observation.  It all seems rather obvious.  What am I missing?</p>
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		<title>By: Larry B</title>
		<link>http://henrysthreads.com/2008/07/science-with-pre-ordained-conclusions/comment-page-1/#comment-112928</link>
		<dc:creator>Larry B</dc:creator>
		<pubDate>Tue, 22 Jul 2008 01:47:14 +0000</pubDate>
		<guid isPermaLink="false">http://www.energionpubs.com/wordpress/?p=1416#comment-112928</guid>
		<description>A couple of points - to further your argument that merely calling for  &quot;peer review&quot; isn&#039;t the panacea of identifying legitimate science, one need only look for example at the Journal of Parapsychology where the supposed science of the paranormal is researched and peer reviewed.  

To your last point, I didn&#039;t find as much disdain for the logic used by Dr. Anderson as you did.  Take for example animals in captivity who develop changes that adversely affect how they will survive in the wild.  I don&#039;t think it&#039;s inappropriate to raise a concern that a lab environment may not accurately reflect the larger environment.  The burden lies on both sides of the argument to perform due diligence in deciding on whether the lab conditions can be extrapolated to the environment at large.  Drug companies face this struggle all the time.</description>
		<content:encoded><![CDATA[<p>A couple of points &#8211; to further your argument that merely calling for  &#8220;peer review&#8221; isn&#8217;t the panacea of identifying legitimate science, one need only look for example at the Journal of Parapsychology where the supposed science of the paranormal is researched and peer reviewed.  </p>
<p>To your last point, I didn&#8217;t find as much disdain for the logic used by Dr. Anderson as you did.  Take for example animals in captivity who develop changes that adversely affect how they will survive in the wild.  I don&#8217;t think it&#8217;s inappropriate to raise a concern that a lab environment may not accurately reflect the larger environment.  The burden lies on both sides of the argument to perform due diligence in deciding on whether the lab conditions can be extrapolated to the environment at large.  Drug companies face this struggle all the time.</p>
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